Bad Seeds Sprout Perilous Dynamics: Stochastic Thermostat Induced Synchronization of Molecular Dynamics Trajectories in Biomolecules, Daniel J. Sindhikara, Seonah Kim, Art Voter, and Adrian E. Roitberg, J. Chem. Theory Chem. 5(6), 1624-1631 (2009).
Theoretical Studies of Short Polyproline Systems: Recalibration of a Molecular Ruler, Elena Dolghih, Wilfredo Ortiz, Seonah Kim, Brent P. Krueger, Jeffrey L. Krause, and Adrian E. Roitberg, J. Phys. Chem. A 113, 4639-4646 (2009).
Crystal Structure Prediction (CSP) of Flexible Molecules using Parallel Genetic Algorithms with a Standard Force Field, Seonah Kim, Anita M. Orendt, Marta B. Ferraro, and Julio C. Facelli, J. Comput. Chem. 30, 1973-1985 (2009).
Crystal Structure Prediction of Flexible Molecules with Genetic Algorithms and Standard Force Field, Julio C. Facelli, Seonah Kim, Anita M. Orendt, Marta B. Ferraro, Ian Pimienta and Victor Bazterra, Aca Cryst., A64, C226 (2008).
Simulation Temperature Jumps for Protein Folding, Seonah Kim and Adrian Roitberg, J. Phys. Chem. B 112, 1525-1532 (2008).
